Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 DFFBP1-201ENST00000433250 979 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 AC124947.2-201ENST00000547118 1133 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 AL133215.2-201ENST00000609242 977 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 AC004840.1-201ENST00000636359 365 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 AC006277.1-201ENST00000624348 1610 ntBASIC16.58■□□□□ 0.24
EBF1Q9UH73 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.58■□□□□ 0.24
EBF1Q9UH73 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
EBF1Q9UH73 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.57■□□□□ 0.24
EBF1Q9UH73 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 AC087499.6-201ENST00000411576 835 ntBASIC16.57■□□□□ 0.24
EBF1Q9UH73 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 BANF1P1-201ENST00000553684 263 ntBASIC16.57■□□□□ 0.24
EBF1Q9UH73 AL079307.3-201ENST00000556114 283 ntBASIC16.57■□□□□ 0.24
EBF1Q9UH73 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EBF1Q9UH73 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
EBF1Q9UH73 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 PCDHB17P-201ENST00000539533 2393 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TUBB8P12-201ENST00000308911 1335 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TUBB7P-202ENST00000428444 1305 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 TUBB8P7-204ENST00000567960 1332 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
EBF1Q9UH73 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 AC135586.1-201ENST00000539323 574 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.56■□□□□ 0.24
EBF1Q9UH73 AC013467.2-201ENST00000605472 835 ntBASIC16.56■□□□□ 0.24
EBF1Q9UH73 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms