Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 AL590787.1-201ENST00000568856 1315 ntBASIC15.83■□□□□ 0.12
NDE1Q9NXR1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDE1Q9NXR1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 AC117947.1-201ENST00000427448 529 ntBASIC15.82■□□□□ 0.12
NDE1Q9NXR1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDE1Q9NXR1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 INTS4P1-201ENST00000438455 1935 ntBASIC15.81■□□□□ 0.12
NDE1Q9NXR1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms