Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 AC015936.2-201ENST00000593177 259 ntBASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.04■□□□□ 0.48
PDLIM7Q9NR12 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 MIR4321-201ENST00000592276 80 ntBASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDLIM7Q9NR12 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 SPDYE17-201ENST00000412399 783 ntBASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 AL365330.1-201ENST00000607459 531 ntBASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 AC068587.10-201ENST00000641210 219 ntBASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PDLIM7Q9NR12 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.02■□□□□ 0.47
PDLIM7Q9NR12 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM7Q9NR12 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms