Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PMS2P4-201ENST00000412466 1052 ntBASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 MIR3909-201ENST00000579518 119 ntBASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
NECTIN3Q9NQS3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NECTIN3Q9NQS3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AC211486.1-202ENST00000416371 468 ntBASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AC211476.1-201ENST00000503899 468 ntBASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AL691403.2-201ENST00000618460 490 ntBASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AC134684.3-201ENST00000641758 218 ntBASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 AL139011.1-202ENST00000642063 584 ntBASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NECTIN3Q9NQS3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms