Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 KRT16P4-201ENST00000453883 522 ntBASIC20.05■□□□□ 0.8
UPF2Q9HAU5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 NKAPP1-205ENST00000585790 367 ntBASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PGM5P2-202ENST00000637225 1043 ntBASIC20.05■□□□□ 0.8
UPF2Q9HAU5 AC016027.1-202ENST00000607927 1699 ntBASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.05■□□□□ 0.8
UPF2Q9HAU5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC023157.3-201ENST00000619086 2088 ntBASIC20.04■□□□□ 0.8
UPF2Q9HAU5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 HCG4-201ENST00000418983 998 ntBASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC132008.2-207ENST00000454517 770 ntBASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC005412.3-201ENST00000580309 715 ntBASIC20.04■□□□□ 0.8
UPF2Q9HAU5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 AC005622.1-201ENST00000636801 1703 ntBASIC20.04■□□□□ 0.8
UPF2Q9HAU5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
UPF2Q9HAU5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 PCED1CP-201ENST00000419887 785 ntBASIC20.03■□□□□ 0.8
UPF2Q9HAU5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AC106795.1-205ENST00000512851 1056 ntBASIC20.03■□□□□ 0.8
UPF2Q9HAU5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms