Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 AC145285.3-201ENST00000564603 959 ntBASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 LINC00554-201ENST00000564841 3011 ntBASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC68Q9H2F9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.39■□□□□ 0.22
CCDC68Q9H2F9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 RHOQP3-201ENST00000437982 621 ntBASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 RPL13AP23-201ENST00000480739 586 ntBASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 AC064836.3-201ENST00000607928 673 ntBASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 BCAR1-209ENST00000546196 1340 ntBASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC68Q9H2F9 ZNF259P1-201ENST00000407656 1365 ntBASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AL590627.1-203ENST00000421194 1026 ntBASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms