Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 AP001350.2-201ENST00000625104 1094 ntBASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AMBRA1Q9C0C7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC006486.2-201ENST00000624246 2199 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 RPS2P1-201ENST00000434010 821 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 OR7E14P-202ENST00000530490 1290 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC005412.3-201ENST00000580309 715 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC139530.3-201ENST00000620344 690 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 AC008735.5-201ENST00000623544 497 ntBASIC15.27■□□□□ 0.04
AMBRA1Q9C0C7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 AC136621.1-201ENST00000624017 2304 ntBASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AMBRA1Q9C0C7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms