Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTPN18Q99952 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PTPN18Q99952 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PTPN18Q99952 MIR663B-201ENST00000408361 115 ntBASIC18.37■□□□□ 0.53
PTPN18Q99952 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AC079328.1-201ENST00000560358 952 ntBASIC18.37■□□□□ 0.53
PTPN18Q99952 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN18Q99952 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 BNIP3P1-202ENST00000550043 1585 ntBASIC18.37■□□□□ 0.53
PTPN18Q99952 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN18Q99952 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN18Q99952 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN18Q99952 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN18Q99952 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN18Q99952 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN18Q99952 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN18Q99952 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN18Q99952 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.36■□□□□ 0.53
PTPN18Q99952 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN18Q99952 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.36■□□□□ 0.53
PTPN18Q99952 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN18Q99952 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 AC020763.4-201ENST00000623414 4170 ntBASIC18.36■□□□□ 0.53
PTPN18Q99952 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTPN18Q99952 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PTPN18Q99952 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN18Q99952 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN18Q99952 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN18Q99952 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 AC060834.1-201ENST00000443027 2032 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 GGT3P-204ENST00000453783 1664 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN18Q99952 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTPN18Q99952 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN18Q99952 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPN18Q99952 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AL591846.1-201ENST00000451736 433 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 AC022137.2-201ENST00000503482 481 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AC023310.1-201ENST00000554836 735 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 AC243562.2-201ENST00000561247 970 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AC016629.1-201ENST00000596579 586 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 AL008638.5-201ENST00000623814 1298 ntBASIC18.35■□□□□ 0.53
PTPN18Q99952 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN18Q99952 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN18Q99952 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN18Q99952 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms