Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NDNQ99608 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.39■□□□□ 0.21
NDNQ99608 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NDNQ99608 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.39■□□□□ 0.21
NDNQ99608 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.39■□□□□ 0.21
NDNQ99608 AL603832.2-201ENST00000566195 2125 ntBASIC16.39■□□□□ 0.21
NDNQ99608 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDNQ99608 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.38■□□□□ 0.21
NDNQ99608 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 AC104109.2-201ENST00000602919 1418 ntBASIC16.38■□□□□ 0.21
NDNQ99608 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.38■□□□□ 0.21
NDNQ99608 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 AC079776.4-201ENST00000511039 504 ntBASIC16.38■□□□□ 0.21
NDNQ99608 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.38■□□□□ 0.21
NDNQ99608 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.38■□□□□ 0.21
NDNQ99608 AL121894.2-201ENST00000602977 491 ntBASIC16.38■□□□□ 0.21
NDNQ99608 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NDNQ99608 AC005622.1-201ENST00000636801 1703 ntBASIC16.38■□□□□ 0.21
NDNQ99608 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 AC126177.1-201ENST00000547829 2218 ntBASIC16.38■□□□□ 0.21
NDNQ99608 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDNQ99608 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.38■□□□□ 0.21
NDNQ99608 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.37■□□□□ 0.21
NDNQ99608 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.37■□□□□ 0.21
NDNQ99608 AC096734.2-201ENST00000562054 433 ntBASIC16.37■□□□□ 0.21
NDNQ99608 AC018845.2-201ENST00000568326 409 ntBASIC16.37■□□□□ 0.21
NDNQ99608 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 AC021097.1-201ENST00000607902 574 ntBASIC16.37■□□□□ 0.21
NDNQ99608 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NDNQ99608 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
NDNQ99608 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NDNQ99608 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDNQ99608 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms