Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC092978.1-202ENST00000637590 1327 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 AL645608.8-201ENST00000606034 2086 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 MEP1AP4-201ENST00000423244 1087 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 EIF4HP1-201ENST00000453115 687 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 AC091271.1-201ENST00000611877 1162 ntBASIC16.47■□□□□ 0.23
PHOX2BQ99453 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHOX2BQ99453 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 AC020765.3-201ENST00000613051 740 ntBASIC16.46■□□□□ 0.23
PHOX2BQ99453 MIR7845-201ENST00000618396 99 ntBASIC16.46■□□□□ 0.23
PHOX2BQ99453 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 AC046185.3-201ENST00000623228 1824 ntBASIC16.46■□□□□ 0.23
PHOX2BQ99453 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 KRT8P19-201ENST00000551916 1455 ntBASIC16.46■□□□□ 0.23
PHOX2BQ99453 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PHOX2BQ99453 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHOX2BQ99453 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PHOX2BQ99453 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PHOX2BQ99453 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PHOX2BQ99453 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PHOX2BQ99453 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.46■□□□□ 0.22
PHOX2BQ99453 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PHOX2BQ99453 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PHOX2BQ99453 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 AL391005.1-201ENST00000623953 2435 ntBASIC16.45■□□□□ 0.22
PHOX2BQ99453 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PHOX2BQ99453 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.45■□□□□ 0.22
PHOX2BQ99453 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms