Protein–RNA interactions for Protein: Q96SM3

CPXM1, Probable carboxypeptidase X1, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXM1Q96SM3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.09■□□□□ 0.33
CPXM1Q96SM3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.09■□□□□ 0.33
CPXM1Q96SM3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 SNHG9-202ENST00000564014 471 ntBASIC17.09■□□□□ 0.33
CPXM1Q96SM3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CPXM1Q96SM3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CPXM1Q96SM3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 SPDYE14P-201ENST00000442619 822 ntBASIC17.08■□□□□ 0.32
CPXM1Q96SM3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 AC139530.3-201ENST00000620344 690 ntBASIC17.08■□□□□ 0.32
CPXM1Q96SM3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPXM1Q96SM3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPXM1Q96SM3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms