Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC007950.2-201ENST00000615045 2347 ntBASIC16.84■□□□□ 0.29
HAPLN3Q96S86 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 TSEN15P1-201ENST00000423257 515 ntBASIC16.84■□□□□ 0.29
HAPLN3Q96S86 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 SPDYE14P-201ENST00000442619 822 ntBASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HAPLN3Q96S86 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
HAPLN3Q96S86 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 AL139400.1-201ENST00000366220 510 ntBASIC16.83■□□□□ 0.28
HAPLN3Q96S86 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 LINC00628-201ENST00000628516 1289 ntBASIC16.83■□□□□ 0.28
HAPLN3Q96S86 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HAPLN3Q96S86 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HAPLN3Q96S86 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms