Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 MEIS3P1-201ENST00000495167 958 ntBASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AC140912.1-201ENST00000577171 1054 ntBASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 CYP4F24P-201ENST00000586049 1580 ntBASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 BTBD7P1-201ENST00000447253 1453 ntBASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 AGGF1P2-201ENST00000426656 2106 ntBASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CCDC85AQ96PX6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AL353779.1-201ENST00000434793 351 ntBASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AC114501.2-201ENST00000439631 535 ntBASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 ZNF890P-202ENST00000530367 1156 ntBASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 MIR4321-201ENST00000592276 80 ntBASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 AL358472.5-202ENST00000641448 1267 ntBASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC85AQ96PX6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 SRD5A3P1-201ENST00000603021 949 ntBASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 AC138969.3-201ENST00000546612 1459 ntBASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 AC138932.2-201ENST00000548268 1459 ntBASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 AC126755.4-201ENST00000549796 1459 ntBASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 PCDHA12-202ENST00000613593 2588 ntBASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC85AQ96PX6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms