Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 MIR4321-201ENST00000592276 80 ntBASIC16.75■□□□□ 0.27
RPRD1AQ96P16 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 PCDH8P1-201ENST00000428983 2773 ntBASIC16.75■□□□□ 0.27
RPRD1AQ96P16 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 AC006449.6-201ENST00000612330 2296 ntBASIC16.75■□□□□ 0.27
RPRD1AQ96P16 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPRD1AQ96P16 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 AC099398.1-201ENST00000567919 2776 ntBASIC16.74■□□□□ 0.27
RPRD1AQ96P16 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPRD1AQ96P16 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPRD1AQ96P16 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms