Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMTM3Q96MX0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC232323.1-201ENST00000540724 2099 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 MINOS1P3-201ENST00000457048 203 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC092647.4-201ENST00000457211 535 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AL160237.2-201ENST00000556165 472 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 BNIP3P18-201ENST00000593976 575 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 Z69720.1-201ENST00000601483 472 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 LINC01023-201ENST00000606054 436 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC114341.1-201ENST00000618070 349 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC073508.3-201ENST00000619697 1419 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 AC007191.1-201ENST00000623179 2995 ntBASIC14.03□□□□□ -0.16
CMTM3Q96MX0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CMTM3Q96MX0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 CICP13-201ENST00000422015 2789 ntBASIC14.02□□□□□ -0.16
CMTM3Q96MX0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 LINC00528-201ENST00000600723 2160 ntBASIC14.02□□□□□ -0.16
CMTM3Q96MX0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.02□□□□□ -0.16
CMTM3Q96MX0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 TERF1P1-201ENST00000311003 1181 ntBASIC14.02□□□□□ -0.17
CMTM3Q96MX0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 CHCHD2P8-201ENST00000429873 447 ntBASIC14.02□□□□□ -0.17
CMTM3Q96MX0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 AC096582.2-201ENST00000510860 516 ntBASIC14.02□□□□□ -0.17
CMTM3Q96MX0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CMTM3Q96MX0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms