Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PGM5P2-202ENST00000637225 1043 ntBASIC16.83■□□□□ 0.28
C9orf72Q96LT7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.83■□□□□ 0.28
C9orf72Q96LT7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 MED15P5-201ENST00000423150 992 ntBASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AL591424.1-201ENST00000442569 1213 ntBASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AC136632.2-201ENST00000512891 861 ntBASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AC140113.2-201ENST00000604370 208 ntBASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
C9orf72Q96LT7 AC069224.1-201ENST00000566372 1715 ntBASIC16.82■□□□□ 0.28
C9orf72Q96LT7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AL353732.1-201ENST00000569618 1459 ntBASIC16.81■□□□□ 0.28
C9orf72Q96LT7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 KRT18P13-201ENST00000400056 1290 ntBASIC16.81■□□□□ 0.28
C9orf72Q96LT7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AC107918.2-201ENST00000530817 355 ntBASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
C9orf72Q96LT7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf72Q96LT7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C9orf72Q96LT7 ELK2BP-201ENST00000415014 1224 ntBASIC16.8■□□□□ 0.28
C9orf72Q96LT7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms