Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 KRT8P23-201ENST00000560090 1207 ntBASIC15.75■□□□□ 0.11
RNF31Q96EP0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 AC092850.2-201ENST00000623821 2697 ntBASIC15.75■□□□□ 0.11
RNF31Q96EP0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF31Q96EP0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF31Q96EP0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AL645728.1-201ENST00000366221 2101 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AL512638.1-201ENST00000457493 794 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 AC069120.2-201ENST00000524091 540 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AL512356.2-201ENST00000546955 174 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AC140878.1-201ENST00000565277 250 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AJ011932.1-201ENST00000621707 465 ntBASIC15.74■□□□□ 0.11
RNF31Q96EP0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF31Q96EP0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF31Q96EP0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 SNX33P1-201ENST00000592116 1762 ntBASIC15.73■□□□□ 0.11
RNF31Q96EP0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 AC142381.1-201ENST00000426099 345 ntBASIC15.73■□□□□ 0.11
RNF31Q96EP0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 KRT18P34-201ENST00000488218 1270 ntBASIC15.73■□□□□ 0.11
RNF31Q96EP0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 SPDYE12P-201ENST00000618416 771 ntBASIC15.73■□□□□ 0.11
RNF31Q96EP0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF31Q96EP0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF31Q96EP0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms