Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ARRDC3Q96B67 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ARRDC3Q96B67 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
ARRDC3Q96B67 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 AC079328.2-201ENST00000561241 3354 ntBASIC16.14■□□□□ 0.17
ARRDC3Q96B67 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
ARRDC3Q96B67 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SDHAP3-202ENST00000515467 728 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 AP005018.1-201ENST00000525475 301 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SPDYE22P-201ENST00000582158 798 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 AL132655.2-201ENST00000596276 594 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 AC004461.2-201ENST00000629517 803 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 OR6D1P-203ENST00000641209 4860 ntBASIC16.13■□□□□ 0.17
ARRDC3Q96B67 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARRDC3Q96B67 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARRDC3Q96B67 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARRDC3Q96B67 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.12■□□□□ 0.17
ARRDC3Q96B67 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ARRDC3Q96B67 PCDHA14-201ENST00000506751 2298 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms