Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 AP001258.2-201ENST00000529891 490 ntBASIC16.04■□□□□ 0.16
CLDN23Q96B33 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 GNRHR2-203ENST00000581100 1187 ntBASIC16.04■□□□□ 0.16
CLDN23Q96B33 RN7SL190P-201ENST00000582519 257 ntBASIC16.04■□□□□ 0.16
CLDN23Q96B33 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN23Q96B33 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN23Q96B33 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN23Q96B33 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN23Q96B33 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 KRT18P64-201ENST00000434946 1219 ntBASIC16.03■□□□□ 0.16
CLDN23Q96B33 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 AC023310.1-201ENST00000554836 735 ntBASIC16.03■□□□□ 0.16
CLDN23Q96B33 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN23Q96B33 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN23Q96B33 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 GGT3P-204ENST00000453783 1664 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AL603756.1-201ENST00000606511 2163 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 MIR326-201ENST00000362220 95 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 SLC25A24P2-201ENST00000415059 510 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 C2orf27AP3-201ENST00000434123 579 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AC022137.2-201ENST00000503482 481 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN23Q96B33 AL354718.3-201ENST00000616414 581 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 CR382287.1-201ENST00000623954 586 ntBASIC16.02■□□□□ 0.16
CLDN23Q96B33 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN23Q96B33 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN23Q96B33 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CLDN23Q96B33 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN23Q96B33 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN23Q96B33 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms