Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 AC016027.1-202ENST00000607927 1699 ntBASIC14.3□□□□□ -0.12
SPTSSAQ969W0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPTSSAQ969W0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC008741.2-201ENST00000612792 3115 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 KRT18P2-201ENST00000447938 1258 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC112191.1-201ENST00000523689 701 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AL121894.2-201ENST00000602977 491 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 WASH6P-202ENST00000359512 1437 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC008894.3-201ENST00000624324 3103 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AL365203.3-201ENST00000609742 2057 ntBASIC14.29□□□□□ -0.12
SPTSSAQ969W0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSAQ969W0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AC093724.1-201ENST00000448659 1027 ntBASIC14.28□□□□□ -0.12
SPTSSAQ969W0 KRT18P3-201ENST00000451602 1288 ntBASIC14.28□□□□□ -0.12
SPTSSAQ969W0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 AL365330.1-201ENST00000607459 531 ntBASIC14.28□□□□□ -0.12
SPTSSAQ969W0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
SPTSSAQ969W0 FAM197Y3-203ENST00000618346 717 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms