Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 PRYP6-201ENST00000514804 343 ntBASIC15.94■□□□□ 0.14
ATL1Q8WXF7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AC099522.2-201ENST00000607001 744 ntBASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AL365330.1-201ENST00000607459 531 ntBASIC15.94■□□□□ 0.14
ATL1Q8WXF7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AC091812.2-201ENST00000619081 385 ntBASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 AC073439.1-201ENST00000624121 1774 ntBASIC15.94■□□□□ 0.14
ATL1Q8WXF7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
ATL1Q8WXF7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 MIR648-201ENST00000385046 94 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 AL671277.1-201ENST00000429656 993 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 FAM58CP-201ENST00000435741 640 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 RN7SL589P-201ENST00000481268 310 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 POLD2P1-201ENST00000511220 997 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 PGAM5P1-201ENST00000518923 814 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 MTDHP5-201ENST00000598980 586 ntBASIC15.93■□□□□ 0.14
ATL1Q8WXF7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATL1Q8WXF7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 AL355306.1-201ENST00000415580 579 ntBASIC15.92■□□□□ 0.14
ATL1Q8WXF7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 C20orf181-201ENST00000623918 480 ntBASIC15.92■□□□□ 0.14
ATL1Q8WXF7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms