Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CKAP2Q8WWK9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CKAP2Q8WWK9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CKAP2Q8WWK9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CKAP2Q8WWK9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CKAP2Q8WWK9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CKAP2Q8WWK9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
CKAP2Q8WWK9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.21■□□□□ 0.18
CKAP2Q8WWK9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CKAP2Q8WWK9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AL390755.1-201ENST00000623716 2027 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ARMC10P1-201ENST00000313754 855 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 CHCHD2P8-201ENST00000429873 447 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AC114341.1-201ENST00000618070 349 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AP001350.2-201ENST00000625104 1094 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 AC013726.1-201ENST00000563747 2285 ntBASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKAP2Q8WWK9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 AC232323.1-201ENST00000540724 2099 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 REXO1L5P-201ENST00000622260 2098 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 C18orf15-201ENST00000623680 2534 ntBASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKAP2Q8WWK9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms