Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 OR7E47P-204ENST00000575924 449 ntBASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 MIR4751-201ENST00000578027 74 ntBASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 MIR4515-201ENST00000584082 81 ntBASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 MTDHP5-201ENST00000598980 586 ntBASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SEMA6DQ8NFY4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AC108751.1-201ENST00000490852 363 ntBASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CXCL1P1-201ENST00000502804 216 ntBASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SEMA6DQ8NFY4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SEMA6DQ8NFY4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms