Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AC063952.2-201ENST00000498792 1227 ntBASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AC093827.2-201ENST00000512654 315 ntBASIC14.13□□□□□ -0.15
BEST4Q8NFU0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.13□□□□□ -0.15
BEST4Q8NFU0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 INTS4P1-201ENST00000438455 1935 ntBASIC14.13□□□□□ -0.15
BEST4Q8NFU0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 AC005089.1-201ENST00000619486 2241 ntBASIC14.13□□□□□ -0.15
BEST4Q8NFU0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.13□□□□□ -0.15
BEST4Q8NFU0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 AC004817.3-201ENST00000602957 2129 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SPDYE21P-201ENST00000413323 827 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 LINC00982-205ENST00000420957 435 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 PCDHA3-202ENST00000532566 4594 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 AL671710.1-201ENST00000610245 2349 ntBASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BEST4Q8NFU0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AC243591.1-201ENST00000452967 1364 ntBASIC14.11□□□□□ -0.15
BEST4Q8NFU0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AL109954.1-202ENST00000564051 2148 ntBASIC14.11□□□□□ -0.15
BEST4Q8NFU0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms