Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC82Q8N4S0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19■□□□□ 0.63
CCDC82Q8N4S0 U82695.1-201ENST00000635752 1889 ntBASIC19■□□□□ 0.63
CCDC82Q8N4S0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19■□□□□ 0.63
CCDC82Q8N4S0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 HYMAI-201ENST00000635591 3347 ntBASIC19■□□□□ 0.63
CCDC82Q8N4S0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC82Q8N4S0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 AL596087.1-201ENST00000400979 1969 ntBASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 RBPMS2P1-201ENST00000437762 623 ntBASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC82Q8N4S0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 AC023141.5-201ENST00000458585 616 ntBASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 PCDHA1-201ENST00000378133 2726 ntBASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC82Q8N4S0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 AL592424.1-201ENST00000563624 1536 ntBASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 AL139400.1-201ENST00000366220 510 ntBASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 GPS2P2-201ENST00000430745 888 ntBASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC82Q8N4S0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms