Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC50Q8IVM0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC50Q8IVM0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 AC148477.8-201ENST00000624298 468 ntBASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CCDC50Q8IVM0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 AC092910.1-201ENST00000482027 1129 ntBASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 AL603832.2-201ENST00000566195 2125 ntBASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 MIR4751-201ENST00000578027 74 ntBASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC50Q8IVM0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC50Q8IVM0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms