Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX6Q8HWS3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC093724.1-201ENST00000448659 1027 ntBASIC16.96■□□□□ 0.31
RFX6Q8HWS3 FDX1P1-201ENST00000449115 551 ntBASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC120114.3-201ENST00000611923 658 ntBASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 ZNF259P1-201ENST00000407656 1365 ntBASIC16.96■□□□□ 0.31
RFX6Q8HWS3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AL162727.3-201ENST00000635661 2787 ntBASIC16.96■□□□□ 0.31
RFX6Q8HWS3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFX6Q8HWS3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX6Q8HWS3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.96■□□□□ 0.3
RFX6Q8HWS3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.96■□□□□ 0.3
RFX6Q8HWS3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX6Q8HWS3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.96■□□□□ 0.3
RFX6Q8HWS3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 SLC25A1P1-201ENST00000528351 927 ntBASIC16.95■□□□□ 0.3
RFX6Q8HWS3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX6Q8HWS3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms