Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC138649.4-201ENST00000612222 287 ntBASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC073592.8-201ENST00000624126 511 ntBASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 AC006449.6-201ENST00000612330 2296 ntBASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRTM4Q86VH4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 AC005498.2-205ENST00000593218 784 ntBASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 CETN4P-206ENST00000642099 2168 ntBASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRTM4Q86VH4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 HLA-V-204ENST00000476601 1289 ntBASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AC097493.3-201ENST00000509725 367 ntBASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AC093214.1-201ENST00000511688 1107 ntBASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 AL589739.1-201ENST00000607720 493 ntBASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 SPDYE12P-201ENST00000618416 771 ntBASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRTM4Q86VH4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms