Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 YBX1P6-201ENST00000442962 1002 ntBASIC11.12□□□□□ -0.63
CSMD3Q7Z407 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.12□□□□□ -0.63
CSMD3Q7Z407 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AC006001.1-201ENST00000325130 474 ntBASIC11.12□□□□□ -0.63
CSMD3Q7Z407 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.12□□□□□ -0.63
CSMD3Q7Z407 UFM1-202ENST00000379649 846 ntTSL 4 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ADM-202ENST00000524948 584 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AC124947.2-201ENST00000547118 1133 ntBASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC11.12□□□□□ -0.63
CSMD3Q7Z407 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 SOCS2P1-201ENST00000417727 557 ntBASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC025279.2-201ENST00000569730 653 ntBASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 MIR4321-201ENST00000592276 80 ntBASIC11.11□□□□□ -0.63
CSMD3Q7Z407 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC016396.2-201ENST00000562575 1417 ntBASIC11.11□□□□□ -0.63
CSMD3Q7Z407 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AC020914.3-201ENST00000594712 304 ntBASIC11.11□□□□□ -0.63
CSMD3Q7Z407 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.11□□□□□ -0.63
CSMD3Q7Z407 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 MTX1P1-201ENST00000440904 838 ntBASIC11.1□□□□□ -0.63
CSMD3Q7Z407 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 PCDHB18P-201ENST00000524813 2368 ntBASIC11.1□□□□□ -0.63
CSMD3Q7Z407 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.1□□□□□ -0.63
CSMD3Q7Z407 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms