Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 AL928711.1-201ENST00000570165 459 ntBASIC10.87□□□□□ -0.67
SCXQ7RTU7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 AL139327.4-201ENST00000612362 153 ntBASIC10.87□□□□□ -0.67
SCXQ7RTU7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 AL355312.1-201ENST00000407115 2176 ntBASIC10.87□□□□□ -0.67
SCXQ7RTU7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SCXQ7RTU7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SCXQ7RTU7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ST20-AS1-201ENST00000560255 4223 ntBASIC10.86□□□□□ -0.67
SCXQ7RTU7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ACTG1P14-201ENST00000446382 1122 ntBASIC10.86□□□□□ -0.67
SCXQ7RTU7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC068137.2-201ENST00000605408 478 ntBASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 OR2I1P-209ENST00000641730 5365 ntBASIC10.86□□□□□ -0.67
SCXQ7RTU7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SCXQ7RTU7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC10.85□□□□□ -0.67
SCXQ7RTU7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.85□□□□□ -0.67
SCXQ7RTU7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.85□□□□□ -0.67
SCXQ7RTU7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC10.85□□□□□ -0.67
SCXQ7RTU7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.85□□□□□ -0.67
SCXQ7RTU7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SCXQ7RTU7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms