Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AL049757.1-201ENST00000616842 1596 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ME2P1-201ENST00000426028 1970 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AL020989.1-201ENST00000422979 469 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AC034105.1-201ENST00000563488 319 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AC006557.2-201ENST00000592985 1240 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AC027601.4-201ENST00000611259 610 ntBASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDZRN4Q6ZMN7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 KRT18P13-201ENST00000400056 1290 ntBASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 MIR940-201ENST00000401276 94 ntBASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.8■□□□□ 0.6
PDZRN4Q6ZMN7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 KRT18P27-201ENST00000427733 1299 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 FAM197Y3-203ENST00000618346 717 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC005089.1-201ENST00000619486 2241 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms