Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AL355306.1-201ENST00000415580 579 ntBASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AL671277.1-201ENST00000429656 993 ntBASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AL078644.1-201ENST00000609881 752 ntBASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NIPAL1Q6NVV3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 MIR1233-2-201ENST00000408138 82 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 MIR1233-1-201ENST00000408722 82 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC010327.4-202ENST00000591484 748 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC092902.6-201ENST00000641783 218 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 AC092919.2-201ENST00000623631 1645 ntBASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NIPAL1Q6NVV3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL1Q6NVV3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms