Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 BASP1P1-201ENST00000430708 665 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AL592309.1-201ENST00000443127 649 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AL512356.2-201ENST00000546955 174 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AC015911.4-201ENST00000588022 1070 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF43Q68DV7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 AC016027.1-202ENST00000607927 1699 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 AC023824.1-201ENST00000562945 2975 ntBASIC17.1■□□□□ 0.33
RNF43Q68DV7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF43Q68DV7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 FAM58DP-201ENST00000428076 619 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 AP002490.2-201ENST00000524791 560 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 AC073389.1-201ENST00000595595 795 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 AC008267.7-201ENST00000624570 1194 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 KRT8P39-201ENST00000396270 1433 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 AC068418.2-201ENST00000577309 3703 ntBASIC17.09■□□□□ 0.33
RNF43Q68DV7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF43Q68DV7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
RNF43Q68DV7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF43Q68DV7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF43Q68DV7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF43Q68DV7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF43Q68DV7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RNF43Q68DV7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms