Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL1Q00532 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKL1Q00532 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 AC007967.2-201ENST00000432613 625 ntBASIC16.06■□□□□ 0.16
CDKL1Q00532 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CDKL1Q00532 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.06■□□□□ 0.16
CDKL1Q00532 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKL1Q00532 AC018845.2-201ENST00000568326 409 ntBASIC16.06■□□□□ 0.16
CDKL1Q00532 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKL1Q00532 FAM197Y3-203ENST00000618346 717 ntBASIC16.06■□□□□ 0.16
CDKL1Q00532 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKL1Q00532 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDKL1Q00532 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKL1Q00532 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKL1Q00532 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 AC005622.1-201ENST00000636801 1703 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKL1Q00532 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 KRT18P34-201ENST00000488218 1270 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 RNA5SP416-201ENST00000516838 111 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PDPK2P-202ENST00000562415 1191 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 AL078644.1-201ENST00000609881 752 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 AC027601.4-201ENST00000611259 610 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 U82695.1-201ENST00000635752 1889 ntBASIC16.05■□□□□ 0.16
CDKL1Q00532 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDKL1Q00532 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKL1Q00532 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKL1Q00532 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKL1Q00532 AC026396.1-201ENST00000419388 421 ntBASIC16.04■□□□□ 0.16
CDKL1Q00532 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDKL1Q00532 AC074386.1-202ENST00000463561 864 ntBASIC16.04■□□□□ 0.16
CDKL1Q00532 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 SLC25A1P1-201ENST00000528351 927 ntBASIC16.04■□□□□ 0.16
CDKL1Q00532 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKL1Q00532 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms