Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 ADH5P3-201ENST00000433842 1137 ntBASIC17.02■□□□□ 0.32
IRX4P78413 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.02■□□□□ 0.32
IRX4P78413 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX4P78413 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.02■□□□□ 0.32
IRX4P78413 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.02■□□□□ 0.32
IRX4P78413 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IRX4P78413 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.02■□□□□ 0.32
IRX4P78413 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
IRX4P78413 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.02■□□□□ 0.31
IRX4P78413 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
IRX4P78413 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.02■□□□□ 0.31
IRX4P78413 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
IRX4P78413 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.02■□□□□ 0.31
IRX4P78413 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 AL590787.1-201ENST00000568856 1315 ntBASIC17.01■□□□□ 0.31
IRX4P78413 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
IRX4P78413 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 AC005237.2-201ENST00000434368 219 ntBASIC17.01■□□□□ 0.31
IRX4P78413 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.01■□□□□ 0.31
IRX4P78413 HLA-J-202ENST00000469281 1241 ntBASIC17.01■□□□□ 0.31
IRX4P78413 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX4P78413 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX4P78413 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.01■□□□□ 0.31
IRX4P78413 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IRX4P78413 AC026120.1-201ENST00000611536 926 ntBASIC17.01■□□□□ 0.31
IRX4P78413 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IRX4P78413 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.01■□□□□ 0.31
IRX4P78413 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.01■□□□□ 0.31
IRX4P78413 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
IRX4P78413 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17■□□□□ 0.31
IRX4P78413 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17■□□□□ 0.31
IRX4P78413 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17■□□□□ 0.31
IRX4P78413 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 AC002056.1-201ENST00000395613 760 ntBASIC17■□□□□ 0.31
IRX4P78413 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 AL671277.1-201ENST00000429656 993 ntBASIC17■□□□□ 0.31
IRX4P78413 AC055876.3-201ENST00000431496 288 ntBASIC17■□□□□ 0.31
IRX4P78413 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17■□□□□ 0.31
IRX4P78413 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17■□□□□ 0.31
IRX4P78413 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17■□□□□ 0.31
IRX4P78413 KRT8P48-201ENST00000515599 1220 ntBASIC17■□□□□ 0.31
IRX4P78413 ACTL9-202ENST00000612068 1252 ntBASIC17■□□□□ 0.31
IRX4P78413 AC138649.4-201ENST00000612222 287 ntBASIC17■□□□□ 0.31
IRX4P78413 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IRX4P78413 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17■□□□□ 0.31
IRX4P78413 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IRX4P78413 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms