Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RAE1P78406 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 AC142381.1-201ENST00000426099 345 ntBASIC15.41■□□□□ 0.06
RAE1P78406 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 KRT18P58-201ENST00000527480 1120 ntBASIC15.41■□□□□ 0.06
RAE1P78406 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.41■□□□□ 0.06
RAE1P78406 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.41■□□□□ 0.06
RAE1P78406 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 AC134407.2-201ENST00000625089 1978 ntBASIC15.41■□□□□ 0.06
RAE1P78406 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RAE1P78406 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.41■□□□□ 0.06
RAE1P78406 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAE1P78406 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.41■□□□□ 0.06
RAE1P78406 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.4■□□□□ 0.06
RAE1P78406 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.4■□□□□ 0.06
RAE1P78406 CROCCP1-201ENST00000426910 5675 ntBASIC15.4■□□□□ 0.06
RAE1P78406 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.4■□□□□ 0.06
RAE1P78406 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.4■□□□□ 0.06
RAE1P78406 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 KRT8P48-201ENST00000515599 1220 ntBASIC15.4■□□□□ 0.06
RAE1P78406 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 LINC01225-203ENST00000563550 1244 ntBASIC15.4■□□□□ 0.06
RAE1P78406 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.4■□□□□ 0.06
RAE1P78406 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.4■□□□□ 0.06
RAE1P78406 AC011477.6-201ENST00000604980 1927 ntBASIC15.4■□□□□ 0.06
RAE1P78406 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 AC092384.3-202ENST00000564646 2873 ntBASIC15.4■□□□□ 0.06
RAE1P78406 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
RAE1P78406 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAE1P78406 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAE1P78406 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.39■□□□□ 0.05
RAE1P78406 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAE1P78406 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.39■□□□□ 0.05
RAE1P78406 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.39■□□□□ 0.05
RAE1P78406 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAE1P78406 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAE1P78406 AC004832.2-201ENST00000426397 482 ntBASIC15.39■□□□□ 0.05
RAE1P78406 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.39■□□□□ 0.05
RAE1P78406 SPCS2P4-201ENST00000436160 681 ntBASIC15.39■□□□□ 0.05
RAE1P78406 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAE1P78406 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.39■□□□□ 0.05
RAE1P78406 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.39■□□□□ 0.05
RAE1P78406 FAM86C2P-203ENST00000528684 1004 ntBASIC15.39■□□□□ 0.05
RAE1P78406 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.39■□□□□ 0.05
RAE1P78406 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms