Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 MIR346-201ENST00000362234 95 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 AC093724.1-201ENST00000448659 1027 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.34□□□□□ -0.11
UBE2NP61088 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC093520.2-201ENST00000561830 333 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.34□□□□□ -0.11
UBE2NP61088 LINC00628-201ENST00000628516 1289 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2NP61088 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2NP61088 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2NP61088 NORAD-201ENST00000565493 5339 ntBASIC14.34□□□□□ -0.11
UBE2NP61088 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2NP61088 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
UBE2NP61088 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2NP61088 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2NP61088 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2NP61088 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2NP61088 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 HLA-H-201ENST00000383620 1096 ntBASIC14.33□□□□□ -0.12
UBE2NP61088 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2NP61088 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2NP61088 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBE2NP61088 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2NP61088 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2NP61088 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.32□□□□□ -0.12
UBE2NP61088 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBE2NP61088 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2NP61088 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2NP61088 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms