Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL359258.3-201ENST00000622910 2331 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 RBM17P3-201ENST00000417687 1192 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.34□□□□□ -0.27
SPCS3P61009 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 AC132008.2-207ENST00000454517 770 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 AC087163.2-201ENST00000457299 853 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 AC106795.1-205ENST00000512851 1056 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 AC139887.3-201ENST00000568585 713 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.34□□□□□ -0.27
SPCS3P61009 NKAPP1-205ENST00000585790 367 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 REXO1L3P-201ENST00000622202 1288 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 AP001350.2-201ENST00000625104 1094 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 AC079781.5-202ENST00000641784 3743 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 AC010491.1-201ENST00000563101 2797 ntBASIC13.34□□□□□ -0.27
SPCS3P61009 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS3P61009 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SPCS3P61009 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS3P61009 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS3P61009 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
SPCS3P61009 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SPCS3P61009 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.33□□□□□ -0.27
SPCS3P61009 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.33□□□□□ -0.27
SPCS3P61009 GRK6P1-201ENST00000400595 1711 ntBASIC13.33□□□□□ -0.27
SPCS3P61009 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SPCS3P61009 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SPCS3P61009 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.33□□□□□ -0.28
SPCS3P61009 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.33□□□□□ -0.28
SPCS3P61009 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.33□□□□□ -0.28
SPCS3P61009 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.33□□□□□ -0.28
SPCS3P61009 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.33□□□□□ -0.28
SPCS3P61009 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.33□□□□□ -0.28
SPCS3P61009 CYP2A7P1-201ENST00000595391 815 ntBASIC13.33□□□□□ -0.28
SPCS3P61009 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SPCS3P61009 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.33□□□□□ -0.28
SPCS3P61009 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SPCS3P61009 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SPCS3P61009 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.32□□□□□ -0.28
SPCS3P61009 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.32□□□□□ -0.28
SPCS3P61009 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.32□□□□□ -0.28
SPCS3P61009 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SPCS3P61009 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.32□□□□□ -0.28
SPCS3P61009 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.32□□□□□ -0.28
SPCS3P61009 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms