Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN2P57739 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.01■□□□□ 0.15
CLDN2P57739 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN2P57739 BTBD7P1-201ENST00000447253 1453 ntBASIC16.01■□□□□ 0.15
CLDN2P57739 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN2P57739 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN2P57739 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN2P57739 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN2P57739 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN2P57739 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN2P57739 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLDN2P57739 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16■□□□□ 0.15
CLDN2P57739 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 ALOX12P2-203ENST00000570921 1945 ntBASIC16■□□□□ 0.15
CLDN2P57739 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLDN2P57739 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16■□□□□ 0.15
CLDN2P57739 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 ZNF890P-202ENST00000530367 1156 ntBASIC16■□□□□ 0.15
CLDN2P57739 API5-211ENST00000534695 560 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16■□□□□ 0.15
CLDN2P57739 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16■□□□□ 0.15
CLDN2P57739 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CLDN2P57739 AL109936.8-201ENST00000641772 604 ntBASIC16■□□□□ 0.15
CLDN2P57739 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN2P57739 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16■□□□□ 0.15
CLDN2P57739 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN2P57739 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN2P57739 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.99■□□□□ 0.15
CLDN2P57739 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLDN2P57739 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN2P57739 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 DOC2GP-202ENST00000514950 1163 ntBASIC15.99■□□□□ 0.15
CLDN2P57739 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN2P57739 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CLDN2P57739 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.99■□□□□ 0.15
CLDN2P57739 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 AL365330.1-201ENST00000607459 531 ntBASIC15.99■□□□□ 0.15
CLDN2P57739 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLDN2P57739 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.99■□□□□ 0.15
CLDN2P57739 AL358472.5-202ENST00000641448 1267 ntBASIC15.99■□□□□ 0.15
CLDN2P57739 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN2P57739 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLDN2P57739 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms