Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB38P57729 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB38P57729 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB38P57729 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 CNN2P2-201ENST00000443536 909 ntBASIC15.27■□□□□ 0.04
RAB38P57729 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 CNN2P3-201ENST00000450201 906 ntBASIC15.27■□□□□ 0.04
RAB38P57729 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB38P57729 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB38P57729 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
RAB38P57729 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB38P57729 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB38P57729 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RAB38P57729 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB38P57729 AC007967.4-201ENST00000614700 386 ntBASIC15.27■□□□□ 0.04
RAB38P57729 AL136317.3-201ENST00000618497 906 ntBASIC15.27■□□□□ 0.04
RAB38P57729 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB38P57729 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB38P57729 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB38P57729 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB38P57729 AC008677.1-201ENST00000519230 1561 ntBASIC15.27■□□□□ 0.03
RAB38P57729 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
RAB38P57729 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB38P57729 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB38P57729 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB38P57729 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RAB38P57729 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB38P57729 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB38P57729 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB38P57729 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB38P57729 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB38P57729 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB38P57729 MIR4453-201ENST00000584019 89 ntBASIC15.26■□□□□ 0.03
RAB38P57729 AC015911.4-201ENST00000588022 1070 ntBASIC15.26■□□□□ 0.03
RAB38P57729 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB38P57729 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB38P57729 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB38P57729 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB38P57729 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
RAB38P57729 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB38P57729 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms