Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.23■□□□□ 0.99
RIPK4P57078 HLA-V-204ENST00000476601 1289 ntBASIC21.23■□□□□ 0.99
RIPK4P57078 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.23■□□□□ 0.99
RIPK4P57078 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.23■□□□□ 0.99
RIPK4P57078 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.23■□□□□ 0.99
RIPK4P57078 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.23■□□□□ 0.99
RIPK4P57078 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK4P57078 AC026979.3-201ENST00000607315 403 ntBASIC21.23■□□□□ 0.99
RIPK4P57078 AL590560.3-201ENST00000623350 461 ntBASIC21.23■□□□□ 0.99
RIPK4P57078 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
RIPK4P57078 CETN4P-206ENST00000642099 2168 ntBASIC21.23■□□□□ 0.99
RIPK4P57078 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RIPK4P57078 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK4P57078 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.22■□□□□ 0.99
RIPK4P57078 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC21.22■□□□□ 0.99
RIPK4P57078 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RIPK4P57078 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RIPK4P57078 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RIPK4P57078 AC245100.5-201ENST00000452108 331 ntBASIC21.22■□□□□ 0.99
RIPK4P57078 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.22■□□□□ 0.99
RIPK4P57078 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.22■□□□□ 0.99
RIPK4P57078 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.22■□□□□ 0.99
RIPK4P57078 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.22■□□□□ 0.99
RIPK4P57078 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RIPK4P57078 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK4P57078 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RIPK4P57078 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 AL691432.1-201ENST00000596308 1422 ntBASIC21.21■□□□□ 0.99
RIPK4P57078 AC100757.3-201ENST00000622361 1406 ntBASIC21.21■□□□□ 0.99
RIPK4P57078 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK4P57078 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RIPK4P57078 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK4P57078 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.21■□□□□ 0.99
RIPK4P57078 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK4P57078 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RIPK4P57078 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK4P57078 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.21■□□□□ 0.99
RIPK4P57078 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.21■□□□□ 0.99
RIPK4P57078 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK4P57078 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RIPK4P57078 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK4P57078 TEX28P1-201ENST00000613479 1221 ntBASIC21.21■□□□□ 0.99
RIPK4P57078 TEX28P2-201ENST00000617764 1221 ntBASIC21.21■□□□□ 0.99
RIPK4P57078 MTHFR-217ENST00000641820 1569 ntBASIC21.21■□□□□ 0.99
RIPK4P57078 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK4P57078 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RIPK4P57078 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
RIPK4P57078 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.99
RIPK4P57078 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK4P57078 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK4P57078 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RIPK4P57078 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK4P57078 CYP4F24P-201ENST00000586049 1580 ntBASIC21.2■□□□□ 0.98
RIPK4P57078 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK4P57078 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.2■□□□□ 0.98
RIPK4P57078 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK4P57078 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK4P57078 AL080243.2-201ENST00000418783 582 ntBASIC21.2■□□□□ 0.98
RIPK4P57078 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.2■□□□□ 0.98
RIPK4P57078 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms