Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.45■□□□□ 0.22
WNT3AP56704 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3AP56704 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 CDC14C-201ENST00000428251 1719 ntBASIC16.45■□□□□ 0.22
WNT3AP56704 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3AP56704 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 LINC02447-202ENST00000501888 2146 ntBASIC16.44■□□□□ 0.22
WNT3AP56704 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.44■□□□□ 0.22
WNT3AP56704 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 AC092865.5-201ENST00000545435 363 ntBASIC16.44■□□□□ 0.22
WNT3AP56704 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.44■□□□□ 0.22
WNT3AP56704 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 AC022145.2-201ENST00000598203 171 ntBASIC16.44■□□□□ 0.22
WNT3AP56704 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 AC069224.1-201ENST00000566372 1715 ntBASIC16.44■□□□□ 0.22
WNT3AP56704 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 UXT-AS1-201ENST00000590504 1525 ntBASIC16.44■□□□□ 0.22
WNT3AP56704 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.44■□□□□ 0.22
WNT3AP56704 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3AP56704 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
WNT3AP56704 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3AP56704 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3AP56704 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3AP56704 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
WNT3AP56704 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3AP56704 AC245100.5-201ENST00000452108 331 ntBASIC16.43■□□□□ 0.22
WNT3AP56704 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.43■□□□□ 0.22
WNT3AP56704 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3AP56704 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.43■□□□□ 0.22
WNT3AP56704 AL513210.1-201ENST00000629608 234 ntBASIC16.43■□□□□ 0.22
WNT3AP56704 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3AP56704 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3AP56704 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 AC022188.1-201ENST00000620960 1664 ntBASIC16.43■□□□□ 0.22
WNT3AP56704 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3AP56704 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3AP56704 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms