Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 FOXO1B-201ENST00000504678 1527 ntBASIC16.07■□□□□ 0.16
CDKN2DP55273 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN2DP55273 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDKN2DP55273 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN2DP55273 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDKN2DP55273 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.06■□□□□ 0.16
CDKN2DP55273 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKN2DP55273 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKN2DP55273 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CDKN2DP55273 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 MIR4321-201ENST00000592276 80 ntBASIC16.06■□□□□ 0.16
CDKN2DP55273 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.06■□□□□ 0.16
CDKN2DP55273 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 AC092902.6-201ENST00000641783 218 ntBASIC16.06■□□□□ 0.16
CDKN2DP55273 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN2DP55273 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN2DP55273 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CDKN2DP55273 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2DP55273 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 AL355306.1-201ENST00000415580 579 ntBASIC16.05■□□□□ 0.16
CDKN2DP55273 GPX1P2-201ENST00000429271 606 ntBASIC16.05■□□□□ 0.16
CDKN2DP55273 AC245100.5-201ENST00000452108 331 ntBASIC16.05■□□□□ 0.16
CDKN2DP55273 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKN2DP55273 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2DP55273 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.05■□□□□ 0.16
CDKN2DP55273 AC073389.1-201ENST00000595595 795 ntBASIC16.05■□□□□ 0.16
CDKN2DP55273 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2DP55273 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKN2DP55273 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2DP55273 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2DP55273 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2DP55273 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2DP55273 LINC00554-201ENST00000564841 3011 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms