Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
APOC4P55056 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 TERF1P3-201ENST00000505638 1227 ntBASIC11.91□□□□□ -0.5
APOC4P55056 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.91□□□□□ -0.5
APOC4P55056 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.91□□□□□ -0.5
APOC4P55056 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 AL390955.2-201ENST00000603032 514 ntBASIC11.91□□□□□ -0.5
APOC4P55056 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.91□□□□□ -0.5
APOC4P55056 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 AC100757.3-201ENST00000622361 1406 ntBASIC11.91□□□□□ -0.5
APOC4P55056 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.91□□□□□ -0.5
APOC4P55056 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
APOC4P55056 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOC4P55056 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 AC026471.1-201ENST00000564629 3026 ntBASIC11.9□□□□□ -0.5
APOC4P55056 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
APOC4P55056 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 FAM207CP-201ENST00000443486 507 ntBASIC11.9□□□□□ -0.5
APOC4P55056 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
APOC4P55056 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.9□□□□□ -0.5
APOC4P55056 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.9□□□□□ -0.5
APOC4P55056 AC061975.2-201ENST00000581722 295 ntBASIC11.9□□□□□ -0.5
APOC4P55056 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.9□□□□□ -0.5
APOC4P55056 AL138828.2-201ENST00000615812 383 ntBASIC11.9□□□□□ -0.5
APOC4P55056 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
APOC4P55056 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.9□□□□□ -0.5
APOC4P55056 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
APOC4P55056 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOC4P55056 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms