Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SLC7A15P-201ENST00000424028 1363 ntBASIC16.91■□□□□ 0.3
EPHB3P54753 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB3P54753 TIMM17BP1-201ENST00000545713 516 ntBASIC16.91■□□□□ 0.3
EPHB3P54753 AC074044.1-201ENST00000609673 707 ntBASIC16.91■□□□□ 0.3
EPHB3P54753 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHB3P54753 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
EPHB3P54753 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB3P54753 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHB3P54753 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EPHB3P54753 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 AC004987.2-201ENST00000395959 1148 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 DGCR5-201ENST00000399539 862 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 AP006294.1-201ENST00000415407 339 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.9■□□□□ 0.3
EPHB3P54753 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 AC245100.5-201ENST00000452108 331 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
EPHB3P54753 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
EPHB3P54753 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.9■□□□□ 0.3
EPHB3P54753 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
EPHB3P54753 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.9■□□□□ 0.3
EPHB3P54753 CHCHD2P3-201ENST00000603038 451 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 AC004790.1-201ENST00000612686 536 ntBASIC16.9■□□□□ 0.3
EPHB3P54753 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHB3P54753 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHB3P54753 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
EPHB3P54753 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
EPHB3P54753 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 AL691432.1-201ENST00000596308 1422 ntBASIC16.89■□□□□ 0.29
EPHB3P54753 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EPHB3P54753 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
EPHB3P54753 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.89■□□□□ 0.29
EPHB3P54753 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.89■□□□□ 0.29
EPHB3P54753 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EPHB3P54753 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHB3P54753 AC243562.2-201ENST00000561247 970 ntBASIC16.89■□□□□ 0.29
EPHB3P54753 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.89■□□□□ 0.29
EPHB3P54753 AC008494.3-201ENST00000606615 944 ntBASIC16.89■□□□□ 0.29
EPHB3P54753 AC007431.3-201ENST00000623221 587 ntBASIC16.89■□□□□ 0.29
EPHB3P54753 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHB3P54753 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.89■□□□□ 0.29
EPHB3P54753 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms