Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CACNA2D1P54289 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA2D1P54289 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.27■□□□□ 0.35
CACNA2D1P54289 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 MIR770-201ENST00000390219 98 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 SPDYE7P-202ENST00000420373 878 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 TREML5P-201ENST00000421694 576 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 RNA5SP410-201ENST00000516285 106 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 AC003101.2-201ENST00000612557 442 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 FO538757.1-201ENST00000623083 1397 ntBASIC17.26■□□□□ 0.35
CACNA2D1P54289 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CACNA2D1P54289 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA2D1P54289 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 MIR943-201ENST00000401286 94 ntBASIC17.25■□□□□ 0.35
CACNA2D1P54289 AC107890.1-201ENST00000422478 521 ntBASIC17.25■□□□□ 0.35
CACNA2D1P54289 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 AC067863.1-201ENST00000494933 530 ntBASIC17.25■□□□□ 0.35
CACNA2D1P54289 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
CACNA2D1P54289 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA2D1P54289 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA2D1P54289 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA2D1P54289 AC092580.3-201ENST00000430932 139 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms