Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NKX2-5P52952 AC016769.1-201ENST00000409132 1010 ntBASIC13.86□□□□□ -0.19
NKX2-5P52952 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
NKX2-5P52952 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX2-5P52952 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX2-5P52952 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX2-5P52952 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 AC069544.1-201ENST00000609399 999 ntBASIC13.86□□□□□ -0.19
NKX2-5P52952 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NKX2-5P52952 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
NKX2-5P52952 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.86□□□□□ -0.19
NKX2-5P52952 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
NKX2-5P52952 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NKX2-5P52952 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NKX2-5P52952 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX2-5P52952 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 SLC22A20-204ENST00000530038 1673 ntBASIC13.85□□□□□ -0.19
NKX2-5P52952 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-5P52952 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.85□□□□□ -0.19
NKX2-5P52952 PRKY-204ENST00000533551 1019 ntBASIC13.85□□□□□ -0.19
NKX2-5P52952 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 AC008687.5-201ENST00000593746 558 ntBASIC13.85□□□□□ -0.19
NKX2-5P52952 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.85□□□□□ -0.19
NKX2-5P52952 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-5P52952 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-5P52952 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-5P52952 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms