Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 AC005052.1-201ENST00000625181 2492 ntBASIC17.92■□□□□ 0.46
GPC3P51654 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.92■□□□□ 0.46
GPC3P51654 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC3P51654 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.91■□□□□ 0.46
GPC3P51654 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC3P51654 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC3P51654 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC3P51654 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.9■□□□□ 0.46
GPC3P51654 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.9■□□□□ 0.46
GPC3P51654 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
GPC3P51654 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.9■□□□□ 0.46
GPC3P51654 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GPC3P51654 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
GPC3P51654 AC009407.1-201ENST00000568958 598 ntBASIC17.9■□□□□ 0.46
GPC3P51654 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC3P51654 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GPC3P51654 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC3P51654 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GPC3P51654 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.89■□□□□ 0.45
GPC3P51654 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC3P51654 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
GPC3P51654 CROCCP1-201ENST00000426910 5675 ntBASIC17.89■□□□□ 0.45
GPC3P51654 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.89■□□□□ 0.45
GPC3P51654 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.89■□□□□ 0.45
GPC3P51654 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC3P51654 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC3P51654 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC3P51654 AC190387.1-201ENST00000551683 408 ntBASIC17.89■□□□□ 0.45
GPC3P51654 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC3P51654 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.89■□□□□ 0.45
GPC3P51654 AC009118.2-201ENST00000613275 655 ntBASIC17.89■□□□□ 0.45
GPC3P51654 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GPC3P51654 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC3P51654 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GPC3P51654 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms