Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.06■□□□□ 0.64
MRE11P49959 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 TSPY22P-201ENST00000427496 604 ntBASIC19.06■□□□□ 0.64
MRE11P49959 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.06■□□□□ 0.64
MRE11P49959 AF238378.1-201ENST00000526806 358 ntBASIC19.06■□□□□ 0.64
MRE11P49959 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MRE11P49959 MIR3687-2-201ENST00000577708 61 ntBASIC19.06■□□□□ 0.64
MRE11P49959 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRE11P49959 MIR3687-1-201ENST00000614492 61 ntBASIC19.06■□□□□ 0.64
MRE11P49959 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
MRE11P49959 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
MRE11P49959 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRE11P49959 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.06■□□□□ 0.64
MRE11P49959 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRE11P49959 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MRE11P49959 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.06■□□□□ 0.64
MRE11P49959 AC069224.1-201ENST00000566372 1715 ntBASIC19.05■□□□□ 0.64
MRE11P49959 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.05■□□□□ 0.64
MRE11P49959 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 LINC01101-201ENST00000622953 1884 ntBASIC19.05■□□□□ 0.64
MRE11P49959 AC020658.6-201ENST00000623564 1870 ntBASIC19.05■□□□□ 0.64
MRE11P49959 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
MRE11P49959 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.05■□□□□ 0.64
MRE11P49959 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 DUX4L17-201ENST00000557360 1267 ntBASIC19.05■□□□□ 0.64
MRE11P49959 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 REXO1L6P-202ENST00000619970 1078 ntBASIC19.05■□□□□ 0.64
MRE11P49959 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
MRE11P49959 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 LINC00528-201ENST00000600723 2160 ntBASIC19.05■□□□□ 0.64
MRE11P49959 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 AC139749.1-202ENST00000617529 3139 ntBASIC19.05■□□□□ 0.64
MRE11P49959 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRE11P49959 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.04■□□□□ 0.64
MRE11P49959 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 AC007191.1-201ENST00000623179 2995 ntBASIC19.04■□□□□ 0.64
MRE11P49959 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
MRE11P49959 AC074051.2-201ENST00000565115 352 ntBASIC19.04■□□□□ 0.64
MRE11P49959 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.04■□□□□ 0.64
MRE11P49959 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.04■□□□□ 0.64
MRE11P49959 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.04■□□□□ 0.64
MRE11P49959 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.04■□□□□ 0.64
MRE11P49959 AC134684.3-201ENST00000641758 218 ntBASIC19.04■□□□□ 0.64
MRE11P49959 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MRE11P49959 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MRE11P49959 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRE11P49959 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.04■□□□□ 0.64
MRE11P49959 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms