Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.42■□□□□ 0.38
PSEN1P49768 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.42■□□□□ 0.38
PSEN1P49768 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.42■□□□□ 0.38
PSEN1P49768 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PSEN1P49768 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.42■□□□□ 0.38
PSEN1P49768 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 AC092905.1-201ENST00000467527 949 ntBASIC17.42■□□□□ 0.38
PSEN1P49768 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.42■□□□□ 0.38
PSEN1P49768 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC17.42■□□□□ 0.38
PSEN1P49768 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 KRT8P23-201ENST00000560090 1207 ntBASIC17.42■□□□□ 0.38
PSEN1P49768 AC243562.1-201ENST00000560672 389 ntBASIC17.42■□□□□ 0.38
PSEN1P49768 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 CR383656.2-201ENST00000548656 2254 ntBASIC17.42■□□□□ 0.38
PSEN1P49768 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 AL645728.1-201ENST00000366221 2101 ntBASIC17.42■□□□□ 0.38
PSEN1P49768 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PSEN1P49768 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.42■□□□□ 0.38
PSEN1P49768 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PSEN1P49768 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PSEN1P49768 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PSEN1P49768 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.41■□□□□ 0.38
PSEN1P49768 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.41■□□□□ 0.38
PSEN1P49768 KRT18P34-201ENST00000488218 1270 ntBASIC17.41■□□□□ 0.38
PSEN1P49768 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.41■□□□□ 0.38
PSEN1P49768 AC079140.1-201ENST00000508039 487 ntBASIC17.41■□□□□ 0.38
PSEN1P49768 KRT8P48-201ENST00000515599 1220 ntBASIC17.41■□□□□ 0.38
PSEN1P49768 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.41■□□□□ 0.38
PSEN1P49768 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PSEN1P49768 AC133552.4-201ENST00000576103 676 ntBASIC17.41■□□□□ 0.38
PSEN1P49768 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.41■□□□□ 0.38
PSEN1P49768 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.41■□□□□ 0.38
PSEN1P49768 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.41■□□□□ 0.38
PSEN1P49768 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PSEN1P49768 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PSEN1P49768 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PSEN1P49768 AL671710.1-201ENST00000610245 2349 ntBASIC17.41■□□□□ 0.38
PSEN1P49768 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 SNX33P1-201ENST00000592116 1762 ntBASIC17.4■□□□□ 0.38
PSEN1P49768 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSEN1P49768 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PSEN1P49768 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms